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  5. Sobic.001G199200.1

Sobic.001G199200.1


Description : transcription factor *(YABBY)


Gene families : OG_42_0000538 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000538_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G199200.1
Cluster HCAA Clusters: Cluster_307

Target Alias Description ECC score Gene Family Method Actions
Brara.G01769.1 No alias transcription factor *(YABBY) 0.03 Orthogroups_2024-Update
Glyma.01G137200 No alias Plant-specific transcription factor YABBY family protein 0.03 Orthogroups_2024-Update
Glyma.13G157800 No alias plant-specific transcription factor YABBY family protein 0.02 Orthogroups_2024-Update
HORVU5Hr1G007260.1 No alias Unknown function 0.02 Orthogroups_2024-Update
PSME_00013952-RA No alias (at2g26580 : 167.0) YABBY5 (YAB5); CONTAINS InterPro... 0.03 Orthogroups_2024-Update
Potri.006G067800 No alias plant-specific transcription factor YABBY family protein 0.03 Orthogroups_2024-Update
Seita.1G251700.1 No alias transcription factor *(YABBY) 0.03 Orthogroups_2024-Update
Sopen08g027560 No alias YABBY protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0007275 multicellular organism development IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
BP GO:0006528 asparagine metabolic process IEP Predicted GO
BP GO:0006529 asparagine biosynthetic process IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
InterPro domains Description Start Stop
IPR006780 YABBY 51 273
No external refs found!