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  5. Sobic.001G207000.1

Sobic.001G207000.1


Description : Unknown function


Gene families : OG_42_0000643 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000643_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G207000.1
Cluster HCAA Clusters: Cluster_202

Target Alias Description ECC score Gene Family Method Actions
At5g15270 No alias RNA-binding KH domain-containing protein... 0.02 Orthogroups_2024-Update
Bradi1g61240 No alias RNA-binding KH domain-containing protein 0.04 Orthogroups_2024-Update
Glyma.04G088100 No alias RNA-binding KH domain-containing protein 0.03 Orthogroups_2024-Update
Potri.004G123400 No alias RNA-binding KH domain-containing protein 0.04 Orthogroups_2024-Update
evm.model.contig_605.2 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
CC GO:1902554 serine/threonine protein kinase complex IEP Predicted GO
CC GO:1902911 protein kinase complex IEP Predicted GO
CC GO:1990316 Atg1/ULK1 kinase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 45 93
IPR004088 KH_dom_type_1 296 346
IPR004088 KH_dom_type_1 711 774
IPR004088 KH_dom_type_1 156 224
IPR004088 KH_dom_type_1 379 438
No external refs found!