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  5. Sobic.001G212100.1

Sobic.001G212100.1


Description : Unknown function


Gene families : OG_42_0000247 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000247_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G212100.1
Cluster HCAA Clusters: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Bradi3g49710 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.03 Orthogroups_2024-Update
Brara.D01335.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.I04581.1 No alias Unknown function 0.04 Orthogroups_2024-Update
GRMZM2G046782 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.03 Orthogroups_2024-Update
GRMZM2G110929 No alias GRAM domain family protein 0.02 Orthogroups_2024-Update
GRMZM2G113167 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.03 Orthogroups_2024-Update
Glyma.13G270000 No alias GRAM domain family protein 0.04 Orthogroups_2024-Update
Mp7g17580.1 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Potri.003G165400 No alias GRAM domain family protein 0.02 Orthogroups_2024-Update
Pp1s3_504V6 No alias T31B5.20; GRAM domain-containing protein [Arabidopsis thaliana] 0.04 Orthogroups_2024-Update
Solyc01g009760 No alias GRAM domain protein/ABA-responsive-like protein (AHRD... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004182 GRAM 93 209
No external refs found!