Sobic.001G224400.1


Description : component *(eIF-iso4E) of eIF-iso4F unwinding complex


Gene families : OG_42_0002011 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002011_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G224400.1
Cluster HCAA Clusters: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
At4g18040 No alias eIF4E1 [Source:UniProtKB/TrEMBL;Acc:A0A178UXU3] 0.02 Orthogroups_2024-Update
Cre03.g199900 No alias Eukaryotic initiation factor 4E protein 0.03 Orthogroups_2024-Update
Mp1g06030.1 No alias component eIF4E of eIF4F mRNA unwinding complex.... 0.02 Orthogroups_2024-Update
Pp1s39_197V6 No alias eukaryotic translation initiation factor 4e 0.03 Orthogroups_2024-Update
Seita.9G227500.1 No alias component *(eIF-iso4E) of eIF-iso4F unwinding complex 0.09 Orthogroups_2024-Update
evm.model.tig00000310.61 No alias (p48599|if4e1_orysa : 152.0) Eukaryotic translation... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA 16Dec
MF GO:0003743 translation initiation factor activity IEA 16Dec
BP GO:0006413 translational initiation IEA 16Dec
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001040 TIF_eIF_4E 36 190
No external refs found!