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  5. Sobic.001G226900.1

Sobic.001G226900.1


Description : Unknown function


Gene families : OG_42_0000384 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000384_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G226900.1
Cluster HCAA Clusters: Cluster_295

Target Alias Description ECC score Gene Family Method Actions
A4A49_24868 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Bradi3g54750 No alias Zinc finger (C3HC4-type RING finger) family protein 0.02 Orthogroups_2024-Update
Glyma.14G185600 No alias Zinc finger (C3HC4-type RING finger) family protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G084330.1 No alias Unknown function 0.05 Orthogroups_2024-Update
LOC_Os04g01160 No alias zinc finger family protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_218345g0010 No alias (at2g38970 : 115.0) Zinc finger (C3HC4-type RING finger)... 0.05 Orthogroups_2024-Update
PSME_00037848-RA No alias (at3g54780 : 99.8) Zinc finger (C3HC4-type RING finger)... 0.02 Orthogroups_2024-Update
PSME_00055670-RA No alias (at2g38970 : 266.0) Zinc finger (C3HC4-type RING finger)... 0.02 Orthogroups_2024-Update
Seita.9G230200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G508466.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc04g076860 No alias Zinc finger (C3HC4-type RING finger) family protein... 0.02 Orthogroups_2024-Update
Sopen00g011380 No alias von Willebrand factor type A domain 0.02 Orthogroups_2024-Update
Sopen02g018610 No alias von Willebrand factor type A domain 0.03 Orthogroups_2024-Update
Sopen05g034550 No alias von Willebrand factor type A domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 11 38
IPR002035 VWF_A 149 323
No external refs found!