Sobic.001G228200.1

Description : chaperone *(Hsp60)

Gene families : OG_42_0000358 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000358_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.001G228200.1
Cluster	HCAA Clusters: Cluster_259

Target	Alias	Description	ECC score	Gene Family Method
AC215201.3_FG005	No alias	chaperonin-60alpha	0.07	Orthogroups_2024-Update
At3g13470	No alias	Chaperonin 60 subunit beta 2, chloroplastic...	0.02	Orthogroups_2024-Update
At3g13860	No alias	Chaperonin CPN60-like 2, mitochondrial...	0.02	Orthogroups_2024-Update
Brara.B00789.1	No alias	subunit alpha of Cpn60 chaperonin complex & subunit...	0.05	Orthogroups_2024-Update
Brara.C01696.1	No alias	chaperone *(Hsp60)	0.06	Orthogroups_2024-Update
Brara.C03496.1	No alias	chaperone *(Hsp60)	0.08	Orthogroups_2024-Update
Brara.C03936.1	No alias	chaperone *(Hsp60)	0.04	Orthogroups_2024-Update
Brara.E01070.1	No alias	chaperone *(Hsp60)	0.04	Orthogroups_2024-Update
Brara.H00053.1	No alias	chaperone *(Hsp60) & subunit beta of Cpn60 chaperonin...	0.02	Orthogroups_2024-Update
GRMZM2G083716	No alias	chaperonin 60 beta	0.06	Orthogroups_2024-Update
GRMZM2G416120	No alias	heat shock protein 60	0.03	Orthogroups_2024-Update
Glyma.07G009600	No alias	heat shock protein 60-3A	0.03	Orthogroups_2024-Update
Glyma.10G127800	No alias	heat shock protein 60	0.04	Orthogroups_2024-Update
Glyma.20G079300	No alias	heat shock protein 60	0.04	Orthogroups_2024-Update
HORVU0Hr1G038830.19	No alias	subunit alpha of Cpn60 chaperonin complex & subunit...	0.03	Orthogroups_2024-Update
HORVU1Hr1G038680.8	No alias	Unknown function	0.03	Orthogroups_2024-Update
HORVU2Hr1G007840.7	No alias	subunit alpha of Cpn60 chaperonin complex & subunit...	0.04	Orthogroups_2024-Update
Mp6g16880.1	No alias	chaperone (Hsp60)	0.02	Orthogroups_2024-Update
PSME_00000537-RA	No alias	(p21239\|rub1_brana : 764.0) RuBisCO large...	0.02	Orthogroups_2024-Update
Potri.001G054400	No alias	heat shock protein 60	0.03	Orthogroups_2024-Update
Potri.002G252900	No alias	heat shock protein 60	0.03	Orthogroups_2024-Update
Potri.003G173900	No alias	heat shock protein 60	0.03	Orthogroups_2024-Update
Potri.009G009300	No alias	chaperonin-60alpha	0.03	Orthogroups_2024-Update
Pp1s52_245V6	No alias	-like atpase	0.04	Orthogroups_2024-Update
Seita.2G129300.1	No alias	subunit alpha of Cpn60 chaperonin complex & subunit...	0.04	Orthogroups_2024-Update
Seita.9G231400.1	No alias	chaperone *(Hsp60)	0.07	Orthogroups_2024-Update
Sobic.002G131000.1	No alias	subunit alpha of Cpn60 chaperonin complex & subunit...	0.03	Orthogroups_2024-Update
Solyc01g028810	No alias	Chaperonin-60 beta subunit (AHRD V3.3 *** P93570_SOLTU)	0.04	Orthogroups_2024-Update
Solyc02g068730	No alias	Chaperonin 60 alpha subunit (AHRD V3.3 *** Q9ZTV1_CANLI)	0.04	Orthogroups_2024-Update
Solyc03g121640	No alias	Chaperonin Cpn60 (AHRD V3.3 *** A0A124SDT3_CYNCS)	0.02	Orthogroups_2024-Update
Solyc09g091180	No alias	Chaperonin CPN60, mitochondrial (AHRD V3.3 *** CH60A_ARATH)	0.03	Orthogroups_2024-Update
Solyc11g069790	No alias	Chaperonin 60 alpha subunit (AHRD V3.3 *** Q9ZTV1_CANLI)	0.03	Orthogroups_2024-Update
Sopen03g040450	No alias	TCP-1/cpn60 chaperonin family	0.03	Orthogroups_2024-Update
Sopen05g031970	No alias	TCP-1/cpn60 chaperonin family	0.05	Orthogroups_2024-Update
Sopen09g034150	No alias	TCP-1/cpn60 chaperonin family	0.03	Orthogroups_2024-Update
evm.model.contig_552.1	No alias	(q05046\|ch62_cucma : 684.0) Chaperonin CPN60-2,...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	16Dec
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000313	organellar ribosome	IEP	Predicted GO
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0004018	N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity	IEP	Predicted GO
MF	GO:0004568	chitinase activity	IEP	Predicted GO
MF	GO:0004576	oligosaccharyl transferase activity	IEP	Predicted GO
CC	GO:0005759	mitochondrial matrix	IEP	Predicted GO
CC	GO:0005761	mitochondrial ribosome	IEP	Predicted GO
BP	GO:0006022	aminoglycan metabolic process	IEP	Predicted GO
BP	GO:0006026	aminoglycan catabolic process	IEP	Predicted GO
BP	GO:0006030	chitin metabolic process	IEP	Predicted GO
BP	GO:0006032	chitin catabolic process	IEP	Predicted GO
BP	GO:0006040	amino sugar metabolic process	IEP	Predicted GO
BP	GO:0006099	tricarboxylic acid cycle	IEP	Predicted GO
BP	GO:0006101	citrate metabolic process	IEP	Predicted GO
BP	GO:0006188	IMP biosynthetic process	IEP	Predicted GO
MF	GO:0008061	chitin binding	IEP	Predicted GO
MF	GO:0016829	lyase activity	IEP	Predicted GO
MF	GO:0016842	amidine-lyase activity	IEP	Predicted GO
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	Predicted GO
BP	GO:0016999	antibiotic metabolic process	IEP	Predicted GO
BP	GO:0017144	drug metabolic process	IEP	Predicted GO
MF	GO:0031267	small GTPase binding	IEP	Predicted GO
CC	GO:0031974	membrane-enclosed lumen	IEP	Predicted GO
BP	GO:0042737	drug catabolic process	IEP	Predicted GO
CC	GO:0043233	organelle lumen	IEP	Predicted GO
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Predicted GO
CC	GO:0044429	mitochondrial part	IEP	Predicted GO
BP	GO:0046040	IMP metabolic process	IEP	Predicted GO
BP	GO:0046348	amino sugar catabolic process	IEP	Predicted GO
BP	GO:0046907	intracellular transport	IEP	Predicted GO
MF	GO:0046912	transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	IEP	Predicted GO
BP	GO:0051641	cellular localization	IEP	Predicted GO
BP	GO:0051649	establishment of localization in cell	IEP	Predicted GO
CC	GO:0070013	intracellular organelle lumen	IEP	Predicted GO
BP	GO:0072350	tricarboxylic acid metabolic process	IEP	Predicted GO
CC	GO:0098798	mitochondrial protein complex	IEP	Predicted GO
BP	GO:1901071	glucosamine-containing compound metabolic process	IEP	Predicted GO
BP	GO:1901072	glucosamine-containing compound catabolic process	IEP	Predicted GO
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002423	Cpn60/TCP-1	56	558

External Links

No external refs found!

Sobic.001G228200.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation