Solyc03g093530

Description : ethylene-responsive transcription factor (AHRD V3.3 *-* AT5G07580.1)

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc03g093530
Cluster	HCCA clusters: Cluster_89

Target	Alias	Description	ECC score	Gene Family Method
A4A49_03112	No alias	ethylene-responsive transcription factor crf4	0.02	Orthogroups_2024-Update
A4A49_20188	No alias	ethylene-responsive transcription factor erf062	0.02	Orthogroups_2024-Update
A4A49_30015	No alias	ethylene-responsive transcription factor erf019	0.02	Orthogroups_2024-Update
A4A49_33000	No alias	ethylene-responsive transcription factor 14	0.02	Orthogroups_2024-Update
A4A49_35180	No alias	ethylene-responsive transcription factor 1b	0.02	Orthogroups_2024-Update
At4g17500	No alias	Ethylene-responsive transcription factor 1A...	0.05	Orthogroups_2024-Update
At4g39780	No alias	Ethylene-responsive transcription factor ERF060...	0.04	Orthogroups_2024-Update
Bradi1g38110	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Bradi1g72449	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Bradi3g24000	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Bradi5g17640	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Brara.A01860.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.C01524.1	No alias	transcription factor *(CBF/DREB1) & subgroup ERF-III...	0.02	Orthogroups_2024-Update
Brara.D02449.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.03	Orthogroups_2024-Update
Brara.E00876.1	No alias	subgroup ERF-III transcription factor	0.04	Orthogroups_2024-Update
Brara.H01496.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
Brara.I01983.1	No alias	subgroup ERF-IX transcription factor	0.05	Orthogroups_2024-Update
Brara.I04175.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.I04678.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
GRMZM2G169382	No alias	Integrase-type DNA-binding superfamily protein	0.05	Orthogroups_2024-Update
Glyma.01G074200	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.05G062100	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.05G179900	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.09G072000	No alias	Integrase-type DNA-binding superfamily protein	0.05	Orthogroups_2024-Update
Glyma.14G056200	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.16G023800	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.18G051500	No alias	cytokinin response factor 4	0.04	Orthogroups_2024-Update
Glyma.18G252300	No alias	ethylene-responsive element binding factor 13	0.05	Orthogroups_2024-Update
HORVU4Hr1G079630.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
LOC_Os03g07830	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os09g39810	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_426919g0020	No alias	(at1g19210 : 104.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_5629699g0010	No alias	(at5g21960 : 89.0) encodes a member of the DREB...	0.05	Orthogroups_2024-Update
Mp1g20040.1	No alias	transcription factor (ERF)	0.02	Orthogroups_2024-Update
PSME_00005185-RA	No alias	(at4g17500 : 105.0) Encodes a member of the ERF...	0.03	Orthogroups_2024-Update
PSME_00014384-RA	No alias	(at5g21960 : 93.6) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
Potri.014G094500	No alias	cytokinin response factor 5	0.03	Orthogroups_2024-Update
Pp1s276_72V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Seita.1G174700.1	No alias	subgroup ERF-VIII transcription factor	0.02	Orthogroups_2024-Update
Seita.2G276200.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.001G481600.2	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.002G260800.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.004G227400.2	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Sobic.009G170800.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.04	Orthogroups_2024-Update
Solyc02g090770	No alias	Ethylene-responsive transcription factor (AHRD V3.3 -...	0.03	Orthogroups_2024-Update
Solyc03g116610	No alias	Ethylene-responsive transcription factor WIN1 (AHRD V3.3...	0.03	Orthogroups_2024-Update
Solyc04g012050	No alias	Ethylene-responsive transcription factor (AHRD V3.3 -...	0.03	Orthogroups_2024-Update
Solyc04g071770	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Solyc05g052030	No alias	ethylene response factor 4	0.03	Orthogroups_2024-Update
Solyc12g042210	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Sopen02g016210	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen02g033000	No alias	AP2 domain	0.05	Orthogroups_2024-Update
Sopen02g035400	No alias	AP2 domain	0.04	Orthogroups_2024-Update
Sopen02g037700	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen08g003200	No alias	AP2 domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0003333	amino acid transmembrane transport	IEP	Predicted GO
MF	GO:0004497	monooxygenase activity	IEP	Predicted GO
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEP	Predicted GO
MF	GO:0004866	endopeptidase inhibitor activity	IEP	Predicted GO
MF	GO:0004869	cysteine-type endopeptidase inhibitor activity	IEP	Predicted GO
MF	GO:0005215	transporter activity	IEP	Predicted GO
MF	GO:0005342	organic acid transmembrane transporter activity	IEP	Predicted GO
CC	GO:0005875	microtubule associated complex	IEP	Predicted GO
BP	GO:0006820	anion transport	IEP	Predicted GO
BP	GO:0006865	amino acid transport	IEP	Predicted GO
BP	GO:0007017	microtubule-based process	IEP	Predicted GO
MF	GO:0008509	anion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0008514	organic anion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015171	amino acid transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015711	organic anion transport	IEP	Predicted GO
BP	GO:0015849	organic acid transport	IEP	Predicted GO
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	Predicted GO
CC	GO:0030286	dynein complex	IEP	Predicted GO
MF	GO:0030414	peptidase inhibitor activity	IEP	Predicted GO
BP	GO:0034220	ion transmembrane transport	IEP	Predicted GO
CC	GO:0044430	cytoskeletal part	IEP	Predicted GO
MF	GO:0045735	nutrient reservoir activity	IEP	Predicted GO
BP	GO:0046942	carboxylic acid transport	IEP	Predicted GO
MF	GO:0046943	carboxylic acid transmembrane transporter activity	IEP	Predicted GO
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Predicted GO
MF	GO:0050661	NADP binding	IEP	Predicted GO
MF	GO:0061134	peptidase regulator activity	IEP	Predicted GO
MF	GO:0061135	endopeptidase regulator activity	IEP	Predicted GO
BP	GO:0098656	anion transmembrane transport	IEP	Predicted GO
CC	GO:1902494	catalytic complex	IEP	Predicted GO
BP	GO:1903825	organic acid transmembrane transport	IEP	Predicted GO
BP	GO:1905039	carboxylic acid transmembrane transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	37	82

External Links

No external refs found!

Solyc03g093530

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation