1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.001G244900.1

Sobic.001G244900.1


Description : type-I inositol-polyphosphate 5-phosphatase & EC_3.1 hydrolase acting on ester bond


Gene families : OG_42_0000152 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000152_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G244900.1
Cluster HCAA Clusters: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
A4A49_11094 No alias type iv inositol polyphosphate 5-phosphatase 7 0.02 Orthogroups_2024-Update
Bradi2g05270 No alias DNAse I-like superfamily protein 0.04 Orthogroups_2024-Update
PSME_00033809-RA No alias (at3g63240 : 505.0) DNAse I-like superfamily protein;... 0.04 Orthogroups_2024-Update
Pp1s3_527V6 No alias F22D22.24; endonuclease/exonuclease/phosphatase family... 0.03 Orthogroups_2024-Update
Seita.3G062800.1 No alias type-I inositol-polyphosphate 5-phosphatase & EC_3.1... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0007059 chromosome segregation IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
MF GO:0008192 RNA guanylyltransferase activity IEP Predicted GO
MF GO:0008193 tRNA guanylyltransferase activity IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
BP GO:0045132 meiotic chromosome segregation IEP Predicted GO
MF GO:0070568 guanylyltransferase activity IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
BP GO:0098813 nuclear chromosome segregation IEP Predicted GO
BP GO:1903046 meiotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR005135 Endo/exonuclease/phosphatase 106 533
No external refs found!