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  5. Sobic.001G247300.1

Sobic.001G247300.1


Description : P2B-type calcium cation-transporting ATPase *(ACA)


Gene families : OG_42_0000196 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000196_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G247300.1
Cluster HCAA Clusters: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Bradi2g60324 No alias autoinhibited Ca2+-ATPase 11 0.05 Orthogroups_2024-Update
Brara.A02785.1 No alias P2B-type calcium cation-transporting ATPase *(ACA) 0.04 Orthogroups_2024-Update
Brara.B01245.1 No alias P2B-type calcium cation-transporting ATPase *(ACA) 0.03 Orthogroups_2024-Update
Brara.H01727.1 No alias P2B-type calcium cation-transporting ATPase *(ACA) 0.03 Orthogroups_2024-Update
GRMZM2G357620 No alias autoinhibited Ca2+-ATPase 11 0.02 Orthogroups_2024-Update
Glyma.01G193600 No alias calcium ATPase 2 0.04 Orthogroups_2024-Update
Glyma.15G001300 No alias autoinhibited Ca(2+)-ATPase 9 0.04 Orthogroups_2024-Update
MA_10034665g0010 No alias "(at5g57110 : 291.0) Arabidopsis-autoinhibited Ca2+... 0.02 Orthogroups_2024-Update
PSME_00034461-RA No alias (at4g29900 : 433.0) one of the type IIB calcium pump... 0.03 Orthogroups_2024-Update
Potri.006G072900 No alias autoinhibited Ca(2+)-ATPase 10 0.03 Orthogroups_2024-Update
Potri.013G040200 No alias ATPase E1-E2 type family protein / haloacid... 0.02 Orthogroups_2024-Update
Seita.5G200700.1 No alias P2B-type calcium cation-transporting ATPase *(ACA) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006068 ATPase_P-typ_cation-transptr_C 824 994
IPR004014 ATPase_P-typ_cation-transptr_N 106 170
No external refs found!