Sobic.001G252800.1


Description : transcription factor *(DOF)


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G252800.1
Cluster HCAA Clusters: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G089949 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
HORVU6Hr1G065250.4 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
LOC_Os01g15900 No alias expressed protein 0.05 Orthogroups_2024-Update
Pp1s68_214V6 No alias zinc finger 0.03 Orthogroups_2024-Update
Seita.3G327800.1 No alias transcription factor *(DOF) 0.05 Orthogroups_2024-Update
Seita.5G052700.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Seita.6G192200.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Solyc02g067230 No alias Dof zinc finger protein3 0.03 Orthogroups_2024-Update
Solyc02g088070 No alias Dof zinc finger protein (AHRD V3.3 *** W9QEV1_9ROSA) 0.03 Orthogroups_2024-Update
Solyc05g007880 No alias Dof zinc finger protein (AHRD V3.3 *** W9S8B0_9ROSA) 0.02 Orthogroups_2024-Update
Sopen06g022000 No alias Dof domain, zinc finger 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006865 amino acid transport IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR003851 Znf_Dof 108 165
No external refs found!