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  5. Sobic.001G254200.1

Sobic.001G254200.1


Description : substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase complex


Gene families : OG_42_0000475 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000475_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G254200.1
Cluster HCAA Clusters: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G035243 No alias Galactose oxidase/kelch repeat superfamily protein 0.02 Orthogroups_2024-Update
HORVU6Hr1G075590.3 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
LOC_Os03g07530 No alias OsFBK12 - F-box domain and kelch repeat containing... 0.03 Orthogroups_2024-Update
MA_10429291g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00057030-RA No alias (at3g27150 : 329.0) Target gene of MIR2111-5p.;... 0.03 Orthogroups_2024-Update
Seita.8G180800.1 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase complex 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006652 Kelch_1 283 329
IPR006652 Kelch_1 235 281
No external refs found!