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  5. Sobic.001G257800.1

Sobic.001G257800.1


Description : class XI myosin microfilament-based motor protein


Gene families : OG_42_0000130 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000130_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G257800.1
Cluster HCAA Clusters: Cluster_220

Target Alias Description ECC score Gene Family Method Actions
At3g19960 No alias Myosin 1 [Source:UniProtKB/TrEMBL;Acc:F4JCF9] 0.03 Orthogroups_2024-Update
PSME_00022093-RA No alias (at1g17580 : 308.0) Encodes a member of the type XI... 0.04 Orthogroups_2024-Update
PSME_00028363-RA No alias (at5g20490 : 238.0) Encodes a member of the type XI... 0.03 Orthogroups_2024-Update
Solyc06g008530 No alias Myosin XI, putative (AHRD V3.3 *** B9S7I4_RICCO) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEA 16Dec
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016459 myosin complex IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002710 Dilute_dom 1321 1423
IPR001609 Myosin_head_motor_dom 65 721
No external refs found!