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  5. Sobic.001G259500.1

Sobic.001G259500.1


Description : B-G-class Rab-GDF protein


Gene families : OG_42_0000375 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000375_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G259500.1
Cluster HCAA Clusters: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
At1g55190 No alias PRA1 family protein F2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C889] 0.03 Orthogroups_2024-Update
Bradi2g53810 No alias prenylated RAB acceptor 1.B4 0.02 Orthogroups_2024-Update
Brara.E00691.1 No alias B-G-class Rab-GDF protein 0.02 Orthogroups_2024-Update
Glyma.19G161800 No alias PRA1 (Prenylated rab acceptor) family protein 0.03 Orthogroups_2024-Update
Glyma.20G225600 No alias prenylated RAB acceptor 1.E 0.01 Orthogroups_2024-Update
HORVU2Hr1G086930.1 No alias B-G-class Rab-GDF protein 0.02 Orthogroups_2024-Update
Potri.001G472300 No alias prenylated RAB acceptor 1.G2 0.04 Orthogroups_2024-Update
Seita.3G113900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.009G074100.2 No alias B-G-class Rab-GDF protein 0.01 Orthogroups_2024-Update
Solyc06g050570 No alias PRA1 family protein (AHRD V3.3 *** K4C5K1_SOLLC) 0.03 Orthogroups_2024-Update
Solyc10g076360 No alias PRA1 family protein (AHRD V3.3 *** K4D1X8_SOLLC) 0.03 Orthogroups_2024-Update
Sopen07g034370 No alias PRA1 family protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
InterPro domains Description Start Stop
IPR004895 Prenylated_rab_accept_PRA1 34 150
No external refs found!