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  5. Sobic.001G259600.1

Sobic.001G259600.1


Description : Unknown function


Gene families : OG_42_0000349 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000349_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G259600.1
Cluster HCAA Clusters: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
A4A49_10090 No alias protein tify 10a 0.04 Orthogroups_2024-Update
A4A49_42021 No alias protein tify 10a 0.04 Orthogroups_2024-Update
At1g17380 No alias Protein TIFY 11A [Source:UniProtKB/Swiss-Prot;Acc:Q9LDU5] 0.02 Orthogroups_2024-Update
Bradi3g23220 No alias jasmonate-zim-domain protein 1 0.02 Orthogroups_2024-Update
Brara.I04752.1 No alias TIFY-type transcription factor 0.01 Orthogroups_2024-Update
GRMZM2G145412 No alias jasmonate-zim-domain protein 11 0.08 Orthogroups_2024-Update
GRMZM2G145458 No alias jasmonate-zim-domain protein 11 0.04 Orthogroups_2024-Update
GRMZM5G838098 No alias jasmonate-zim-domain protein 1 0.02 Orthogroups_2024-Update
HORVU5Hr1G062290.6 No alias TIFY-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os03g08330 No alias ZIM domain containing protein, putative, expressed 0.05 Orthogroups_2024-Update
LOC_Os10g25230 No alias ZIM domain containing protein, putative, expressed 0.05 Orthogroups_2024-Update
MA_10426545g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_10426545g0020 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_116760g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_137163g0010 No alias (at1g70700 : 84.0) JAZ9 is a protein presumed to be... 0.03 Orthogroups_2024-Update
MA_260312g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_469601g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_470613g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00024561-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Potri.003G068900 No alias jasmonate-zim-domain protein 6 0.02 Orthogroups_2024-Update
Seita.2G388400.1 No alias component *(JAZ) of jasmonic acid receptor complex &... 0.03 Orthogroups_2024-Update
Seita.9G251600.1 No alias TIFY-type transcription factor 0.04 Orthogroups_2024-Update
Seita.9G252300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G517900.1 No alias TIFY-type transcription factor 0.05 Orthogroups_2024-Update
Seita.9G518000.1 No alias TIFY-type transcription factor 0.03 Orthogroups_2024-Update
Seita.9G518100.1 No alias TIFY-type transcription factor 0.04 Orthogroups_2024-Update
Solyc12g009220 No alias jasmonate ZIM-domain protein 1 0.04 Orthogroups_2024-Update
Sopen12g023880 No alias tify domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0004834 tryptophan synthase activity IEP Predicted GO
CC GO:0005811 lipid droplet IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006568 tryptophan metabolic process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006586 indolalkylamine metabolic process IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
BP GO:0042430 indole-containing compound metabolic process IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0045927 positive regulation of growth IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR010399 Tify_dom 82 113
IPR018467 CCT_CS 128 154
No external refs found!