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  5. Sobic.001G260400.1

Sobic.001G260400.1


Description : subunit alpha of TFIIe basal transcription factor complex


Gene families : OG_42_0003973 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003973_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G260400.1
Cluster HCAA Clusters: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
Cre11.g481550 No alias Transcription factor TFIIE, alpha subunit 0.02 Orthogroups_2024-Update
Glyma.06G210400 No alias Transcription factor TFIIE, alpha subunit 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003729 mRNA binding IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
CC GO:0035145 exon-exon junction complex IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
InterPro domains Description Start Stop
IPR024550 TFIIEa/SarR/Rpc3_HTH_dom 41 95
No external refs found!