Sobic.001G262400.1

Description : acetyl-CoA carboxylase *(ACC) & EC_6.3 ligase forming carbon-nitrogen bond & monomeric acetyl-CoA carboxylase *(ACC) & EC_6.4 ligase forming carbon-carbon bond

Gene families : OG_42_0003321 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003321_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.001G262400.1
Cluster	HCAA Clusters: Cluster_245

Target	Alias	Description	ECC score	Gene Family Method
HORVU2Hr1G010440.5	No alias	EC_6.3 ligase forming carbon-nitrogen bond & acetyl-CoA...	0.04	Orthogroups_2024-Update
Kfl00034_0420	kfl00034_0420_v1.1	(at1g36160 : 1573.0) Encodes acetyl-CoA carboxylase....	0.02	Orthogroups_2024-Update
Mp1g28300.1	No alias	monomeric acetyl-CoA carboxylase	0.02	Orthogroups_2024-Update
PSME_00009653-RA	No alias	(at1g36160 : 1861.0) Encodes acetyl-CoA carboxylase....	0.04	Orthogroups_2024-Update
Pp1s158_40V6	No alias	cytosolic acetyl- carboxylase	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003989	acetyl-CoA carboxylase activity	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	16Dec
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	IEA	16Dec
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016421	CoA carboxylase activity	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016885	ligase activity, forming carbon-carbon bonds	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006820	anion transport	IEP	Predicted GO
BP	GO:0006835	dicarboxylic acid transport	IEP	Predicted GO
BP	GO:0015711	organic anion transport	IEP	Predicted GO
BP	GO:0015740	C4-dicarboxylate transport	IEP	Predicted GO
BP	GO:0015743	malate transport	IEP	Predicted GO
BP	GO:0015849	organic acid transport	IEP	Predicted GO
MF	GO:0019842	vitamin binding	IEP	Predicted GO
MF	GO:0030170	pyridoxal phosphate binding	IEP	Predicted GO
BP	GO:0046942	carboxylic acid transport	IEP	Predicted GO
MF	GO:0070279	vitamin B6 binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR034733	AcCoA_carboxyl	1612	1701
IPR034733	AcCoA_carboxyl	1494	1608
IPR005481	BC-like_N	42	159
IPR013537	AcCoA_COase_cen	706	1420
IPR000089	Biotin_lipoyl	659	696
IPR005479	CbamoylP_synth_lsu-like_ATP-bd	205	384

External Links

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Sobic.001G262400.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation