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  5. Sobic.001G267800.1

Sobic.001G267800.1


Description : Unknown function


Gene families : OG_42_0000045 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000045_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G267800.1
Cluster HCAA Clusters: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Brara.A01323.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.B03671.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G159110 No alias Pathogenesis-related thaumatin superfamily protein 0.02 Orthogroups_2024-Update
Glyma.05G204600 No alias osmotin 34 0.02 Orthogroups_2024-Update
Mp1g25360.1 No alias Osmotin-like protein OSML13 OS=Solanum commersonii... 0.02 Orthogroups_2024-Update
Mp2g13870.1 No alias Pathogenesis-related protein 5 OS=Arabidopsis thaliana... 0.03 Orthogroups_2024-Update
Mp2g24470.1 No alias Thaumatin-like protein OS=Olea europaea... 0.03 Orthogroups_2024-Update
PSME_00032520-RA No alias (p33679|zeam_maize : 275.0) Zeamatin precursor - Zea... 0.03 Orthogroups_2024-Update
PSME_00041653-RA No alias (p33679|zeam_maize : 276.0) Zeamatin precursor - Zea... 0.03 Orthogroups_2024-Update
PSME_00045279-RA No alias (at1g19320 : 311.0) Pathogenesis-related thaumatin... 0.03 Orthogroups_2024-Update
PSME_00054893-RA No alias (at1g19320 : 169.0) Pathogenesis-related thaumatin... 0.03 Orthogroups_2024-Update
PSME_00055738-RA No alias (at1g19320 : 285.0) Pathogenesis-related thaumatin... 0.03 Orthogroups_2024-Update
Solyc04g079890 No alias Pathogenesis-related thaumatin family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc04g081550 No alias Pathogenesis-related thaumatin family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc06g073000 No alias Pathogenesis-related thaumatin superfamily protein (AHRD... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004637 phosphoribosylamine-glycine ligase activity IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006144 purine nucleobase metabolic process IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0009112 nucleobase metabolic process IEP Predicted GO
BP GO:0009113 purine nucleobase biosynthetic process IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0046112 nucleobase biosynthetic process IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001938 Thaumatin 30 247
No external refs found!