Sobic.001G272600.2

Description : Unknown function

Gene families : OG_42_0000039 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.001G272600.2
Cluster	HCAA Clusters: Cluster_435

Target	Alias	Description	ECC score	Gene Family Method
A4A49_23432	No alias	putative disease resistance protein rga3	0.02	Orthogroups_2024-Update
A4A49_34434	No alias	putative disease resistance rpp13-like protein 1	0.01	Orthogroups_2024-Update
Glyma.02G026200	No alias	NB-ARC domain-containing disease resistance protein	0.08	Orthogroups_2024-Update
Glyma.11G035001	No alias	NB-ARC domain-containing disease resistance protein	0.01	Orthogroups_2024-Update
Glyma.19G113450	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.08	Orthogroups_2024-Update
LOC_Os01g25720	No alias	disease resistance protein RGA4, putative, expressed	0.01	Orthogroups_2024-Update
LOC_Os12g30590	No alias	disease resistance protein RGA2, putative, expressed	0.02	Orthogroups_2024-Update
Potri.001G029300	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.01	Orthogroups_2024-Update
Seita.6G030400.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Solyc02g084450	No alias	Disease resistance protein (AHRD V3.3 *** A0A124SFK9_CYNCS)	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	16Dec
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Predicted GO
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Predicted GO
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Predicted GO
MF	GO:0043565	sequence-specific DNA binding	IEP	Predicted GO
MF	GO:0140110	transcription regulator activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	182	416

External Links

No external refs found!