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  5. Sobic.001G276600.1

Sobic.001G276600.1


Description : anion transporter *(NRT1/PTR)


Gene families : OG_42_0000015 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G276600.1
Cluster HCAA Clusters: Cluster_298

Target Alias Description ECC score Gene Family Method Actions
At4g21680 No alias Protein NRT1/ PTR FAMILY 7.2... 0.02 Orthogroups_2024-Update
Bradi3g28400 No alias peptide transporter 3 0.03 Orthogroups_2024-Update
Brara.D02462.1 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
Brara.I02628.1 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
GRMZM2G001764 No alias peptide transporter 3 0.03 Orthogroups_2024-Update
Glyma.10G005400 No alias peptide transporter 3 0.02 Orthogroups_2024-Update
HORVU1Hr1G004720.1 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
LOC_Os01g65110 No alias POT family protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g35650 No alias peptide transporter PTR2, putative, expressed 0.04 Orthogroups_2024-Update
PSME_00017196-RA No alias (at5g01180 : 407.0) Encodes a dipeptide transporter... 0.02 Orthogroups_2024-Update
PSME_00046498-RA No alias (at3g21670 : 563.0) Major facilitator superfamily... 0.02 Orthogroups_2024-Update
Potri.001G145200 No alias nitrate transporter 1.5 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
MF GO:0022857 transmembrane transporter activity IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP Predicted GO
MF GO:0004451 isocitrate lyase activity IEP Predicted GO
MF GO:0004512 inositol-3-phosphate synthase activity IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006021 inositol biosynthetic process IEP Predicted GO
BP GO:0009790 embryo development IEP Predicted GO
BP GO:0009793 embryo development ending in seed dormancy IEP Predicted GO
MF GO:0016833 oxo-acid-lyase activity IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
BP GO:0046165 alcohol biosynthetic process IEP Predicted GO
BP GO:0046173 polyol biosynthetic process IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000109 POT_fam 123 535
No external refs found!