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  5. Sobic.001G277300.1

Sobic.001G277300.1


Description : Unknown function


Gene families : OG_42_0000187 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000187_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G277300.1
Cluster HCAA Clusters: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
HORVU1Hr1G037320.9 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os08g09750 No alias OsFBL44 - F-box domain and LRR containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g03730 No alias OsFBX347 - F-box domain containing protein, expressed 0.04 Orthogroups_2024-Update
LOC_Os10g03780 No alias OsFBX351 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g10330 No alias OsFBX416 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
Sobic.009G105400.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Predicted GO
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
MF GO:0008172 S-methyltransferase activity IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009086 methionine biosynthetic process IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0018580 nitronate monooxygenase activity IEP Predicted GO
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 17 51
No external refs found!