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  5. Sobic.001G282400.1

Sobic.001G282400.1


Description : WRKY-type transcription factor


Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G282400.1
Cluster HCAA Clusters: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
AC208110.2_FG001 No alias WRKY DNA-binding protein 35 0.03 Orthogroups_2024-Update
At1g80590 No alias Probable WRKY transcription factor 66... 0.03 Orthogroups_2024-Update
Bradi2g16357 No alias WRKY DNA-binding protein 71 0.03 Orthogroups_2024-Update
GRMZM2G015433 No alias WRKY DNA-binding protein 56 0.03 Orthogroups_2024-Update
GRMZM2G092694 No alias WRKY family transcription factor 0.03 Orthogroups_2024-Update
Glyma.02G112100 No alias WRKY DNA-binding protein 3 0.03 Orthogroups_2024-Update
Glyma.02G115200 No alias WRKY DNA-binding protein 57 0.05 Orthogroups_2024-Update
Glyma.05G123600 No alias WRKY DNA-binding protein 35 0.04 Orthogroups_2024-Update
Glyma.10G138300 No alias WRKY family transcription factor 0.03 Orthogroups_2024-Update
Glyma.19G221700 No alias WRKY family transcription factor 0.05 Orthogroups_2024-Update
HORVU1Hr1G088300.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
HORVU2Hr1G029460.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
HORVU6Hr1G013890.3 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os01g18584 No alias WRKY9, expressed 0.02 Orthogroups_2024-Update
PSME_00010621-RA No alias (at4g26640 : 197.0) member of WRKY Transcription Factor;... 0.02 Orthogroups_2024-Update
PSME_00018337-RA No alias (at5g15130 : 183.0) member of WRKY Transcription Factor;... 0.02 Orthogroups_2024-Update
Sobic.003G138400.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Solyc10g011910 No alias WRKY transcription factor 25 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
MF GO:0043565 sequence-specific DNA binding IEA 16Dec
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003657 WRKY_dom 194 251
No external refs found!