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  5. Sobic.001G285800.1

Sobic.001G285800.1


Description : Unknown function


Gene families : OG_42_0005993 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005993_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G285800.1
Cluster HCAA Clusters: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g13200 No alias expressed protein 0.02 Orthogroups_2024-Update
Solyc08g076740 No alias ER-based factor for assembly of V-ATPase (AHRD V3.3 *-*... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000966 RNA 5'-end processing IEP Predicted GO
BP GO:0001682 tRNA 5'-leader removal IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
CC GO:0030677 ribonuclease P complex IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034471 ncRNA 5'-end processing IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0099116 tRNA 5'-end processing IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1902555 endoribonuclease complex IEP Predicted GO
CC GO:1905348 endonuclease complex IEP Predicted GO
InterPro domains Description Start Stop
IPR021013 ATPase_Vma12 70 179
No external refs found!