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  5. Sobic.001G288100.1

Sobic.001G288100.1


Description : PLATZ-type transcription factor


Gene families : OG_42_0000211 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G288100.1
Cluster HCAA Clusters: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
At1g76590 No alias At1g76590 [Source:UniProtKB/TrEMBL;Acc:Q2HIW3] 0.02 Orthogroups_2024-Update
Bradi4g38790 No alias PLATZ transcription factor family protein 0.02 Orthogroups_2024-Update
Brara.B02918.1 No alias PLATZ-type transcription factor 0.03 Orthogroups_2024-Update
Brara.C04068.1 No alias PLATZ-type transcription factor 0.02 Orthogroups_2024-Update
Brara.F01503.1 No alias PLATZ-type transcription factor 0.02 Orthogroups_2024-Update
Brara.I02755.1 No alias PLATZ-type transcription factor 0.02 Orthogroups_2024-Update
Glyma.01G096000 No alias PLATZ transcription factor family protein 0.04 Orthogroups_2024-Update
Glyma.01G234000 No alias PLATZ transcription factor family protein 0.05 Orthogroups_2024-Update
Glyma.13G147800 No alias PLATZ transcription factor family protein 0.04 Orthogroups_2024-Update
Glyma.19G188200 No alias PLATZ transcription factor family protein 0.04 Orthogroups_2024-Update
LOC_Os02g46610 No alias zinc-binding protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g50120 No alias zinc-binding protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.003G092800 No alias PLATZ transcription factor family protein 0.05 Orthogroups_2024-Update
Pp1s560_1V6 No alias zinc ion binding 0.02 Orthogroups_2024-Update
Solyc08g005100 No alias PLATZ transcription factor family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen06g021440 No alias PLATZ transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
MF GO:1901981 phosphatidylinositol phosphate binding IEP Predicted GO
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006734 DUF597 110 190
No external refs found!