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  5. Sobic.001G299400.1

Sobic.001G299400.1


Description : M10-class (Matrixin) metalloprotease & EC_3.4 hydrolase acting on peptide bond (peptidase)


Gene families : OG_42_0000704 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000704_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G299400.1
Cluster HCAA Clusters: Cluster_239

Target Alias Description ECC score Gene Family Method Actions
Bradi1g44690 No alias Matrixin family protein 0.04 Orthogroups_2024-Update
Glyma.01G036900 No alias Matrixin family protein 0.03 Orthogroups_2024-Update
HORVU7Hr1G039890.3 No alias M10-class (Matrixin) metalloprotease & EC_3.4 hydrolase... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA 16Dec
BP GO:0006508 proteolysis IEA 16Dec
MF GO:0008270 zinc ion binding IEA 16Dec
CC GO:0031012 extracellular matrix IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
MF GO:0002161 aminoacyl-tRNA editing activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001818 Pept_M10_metallopeptidase 170 328
IPR002477 Peptidoglycan-bd-like 65 125
No external refs found!