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  5. Sobic.001G300700.1

Sobic.001G300700.1


Description : Unknown function


Gene families : OG_42_0000145 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000145_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G300700.1
Cluster HCAA Clusters: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
At1g65680 No alias Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6] 0.02 Orthogroups_2024-Update
GRMZM2G059785 No alias expansin B2 0.03 Orthogroups_2024-Update
HORVU1Hr1G054250.9 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G073140.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G105170.1 No alias Unknown function 0.03 Orthogroups_2024-Update
PSME_00008080-RA No alias (q7x6j9|exb17_orysa : 305.0) Expansin-B17 precursor... 0.03 Orthogroups_2024-Update
PSME_00015392-RA No alias (at2g20750 : 239.0) member of BETA-EXPANSINS. Naming... 0.03 Orthogroups_2024-Update
Potri.019G101900 No alias expansin B3 0.03 Orthogroups_2024-Update
Pp1s147_37V6 No alias beta-expansin 3 0.02 Orthogroups_2024-Update
Pp1s251_59V6 No alias beta-expansin 3 0.02 Orthogroups_2024-Update
Seita.9G326900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G300400.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 79 158
IPR007117 Expansin_CBD 170 251
No external refs found!