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  5. Sobic.001G303300.1

Sobic.001G303300.1


Description : Unknown function


Gene families : OG_42_0000186 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000186_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G303300.1
Cluster HCAA Clusters: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
126225 No alias Exostosin family protein 0.03 Orthogroups_2024-Update
A4A49_28855 No alias xyloglucan-specific galacturonosyltransferase 1 0.02 Orthogroups_2024-Update
At1g63450 No alias Xyloglucan-specific galacturonosyltransferase 1... 0.03 Orthogroups_2024-Update
At2g32740 No alias Probable xyloglucan galactosyltransferase GT13... 0.04 Orthogroups_2024-Update
At5g41250 No alias Probable xyloglucan galactosyltransferase GT20... 0.04 Orthogroups_2024-Update
Bradi4g40070 No alias Exostosin family protein 0.03 Orthogroups_2024-Update
Bradi5g18939 No alias glycosyltransferase 18 0.04 Orthogroups_2024-Update
Brara.D01938.1 No alias 1,2-beta-galactosyltransferase *(MUR3-like) 0.03 Orthogroups_2024-Update
GRMZM2G075436 No alias Exostosin family protein 0.02 Orthogroups_2024-Update
Glyma.10G040700 No alias Exostosin family protein 0.03 Orthogroups_2024-Update
LOC_Os03g05070 No alias exostosin family domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g08420 No alias expressed protein 0.03 Orthogroups_2024-Update
Potri.019G070400 No alias Exostosin family protein 0.02 Orthogroups_2024-Update
Pp1s1_428V6 No alias xyloglucan galactosyltransferase 0.03 Orthogroups_2024-Update
Sobic.001G228900.1 No alias 1,2-beta-galactosyltransferase *(MUR3-like) 0.02 Orthogroups_2024-Update
Sobic.001G229100.1 No alias 1,2-beta-galactosyltransferase *(MUR3-like) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!