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  5. Sobic.001G306101.1

Sobic.001G306101.1


Description : Unknown function


Gene families : OG_42_0000143 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000143_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G306101.1
Cluster HCAA Clusters: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
A4A49_12881 No alias u-box domain-containing protein 34 0.02 Orthogroups_2024-Update
At2g24370 No alias Kinase with adenine nucleotide alpha hydrolases-like... 0.03 Orthogroups_2024-Update
Bradi1g46860 No alias Protein kinase protein with adenine nucleotide alpha... 0.03 Orthogroups_2024-Update
Bradi4g38690 No alias U-box domain-containing protein kinase family protein 0.03 Orthogroups_2024-Update
Brara.G00162.1 No alias E3 ubiquitin protein ligase *(PUB34) & EC_2.7... 0.02 Orthogroups_2024-Update
Brara.J00618.1 No alias E3 ubiquitin protein ligase *(PUB51) & EC_2.7... 0.02 Orthogroups_2024-Update
Brara.J00720.1 No alias E3 ubiquitin protein ligase *(PUB51) & EC_2.7... 0.03 Orthogroups_2024-Update
Brara.J01128.1 No alias E3 ubiquitin protein ligase *(PUB34) & EC_2.7... 0.03 Orthogroups_2024-Update
GRMZM2G433433 No alias U-box domain-containing protein kinase family protein 0.02 Orthogroups_2024-Update
Glyma.03G008800 No alias U-box domain-containing protein kinase family protein 0.02 Orthogroups_2024-Update
Glyma.05G221000 No alias Protein kinase protein with adenine nucleotide alpha... 0.02 Orthogroups_2024-Update
Potri.004G170901 No alias Protein kinase protein with adenine nucleotide alpha... 0.03 Orthogroups_2024-Update
Sobic.004G289000.1 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
MF GO:0008649 rRNA methyltransferase activity IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0031167 rRNA methylation IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP Predicted GO
BP GO:0070475 rRNA base methylation IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!