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  5. Sobic.001G309000.1

Sobic.001G309000.1


Description : xyloglucan endotransglucosylase/hydrolase *(XTH) & EC_2.4 glycosyltransferase


Gene families : OG_42_0000032 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000032_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G309000.1
Cluster HCAA Clusters: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
110418 No alias xyloglucan endotransglycosylase 6 0.02 Orthogroups_2024-Update
119243 No alias xyloglucan endotransglucosylase/hydrolase 5 0.02 Orthogroups_2024-Update
267868 No alias xyloglucan endotransglucosylase/hydrolase 5 0.02 Orthogroups_2024-Update
A4A49_04196 No alias xyloglucan endotransglucosylasehydrolase protein 9 0.03 Orthogroups_2024-Update
A4A49_19342 No alias xyloglucan endotransglucosylasehydrolase 2 0.02 Orthogroups_2024-Update
A4A49_30032 No alias putative xyloglucan endotransglucosylasehydrolase protein 16 0.03 Orthogroups_2024-Update
A4A49_31112 No alias putative xyloglucan endotransglucosylasehydrolase protein 0.03 Orthogroups_2024-Update
A4A49_34196 No alias putative xyloglucan endotransglucosylasehydrolase protein 23 0.03 Orthogroups_2024-Update
A4A49_36014 No alias putative xyloglucan endotransglucosylasehydrolase protein 16 0.03 Orthogroups_2024-Update
At5g57530 No alias Probable xyloglucan endotransglucosylase/hydrolase... 0.04 Orthogroups_2024-Update
Bradi1g33810 No alias Xyloglucan endotransglucosylase/hydrolase family protein 0.04 Orthogroups_2024-Update
Glyma.12G080100 No alias xyloglucan endotransglucosylase/hydrolase 32 0.03 Orthogroups_2024-Update
Glyma.13G094900 No alias Xyloglucan endotransglucosylase/hydrolase family protein 0.04 Orthogroups_2024-Update
Glyma.17G157400 No alias xyloglucan endotransglucosylase/hydrolase 6 0.03 Orthogroups_2024-Update
HORVU2Hr1G108420.6 No alias EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update
HORVU7Hr1G086890.2 No alias xyloglucan endotransglucosylase/hydrolase *(XTH) &... 0.03 Orthogroups_2024-Update
LOC_Os06g22919 No alias DEFL9 - Defensin and Defensin-like DEFL family, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g29750 No alias glycosyl hydrolases family 16, putative, expressed 0.04 Orthogroups_2024-Update
MA_10430695g0010 No alias (p35694|bru1_soybn : 327.0) Brassinosteroid-regulated... 0.04 Orthogroups_2024-Update
Mp4g01200.1 No alias Enzyme classification.EC_2 transferases.EC_2.4... 0.02 Orthogroups_2024-Update
PSME_00019699-RA No alias (q39857|xth_soybn : 456.0) Probable xyloglucan... 0.03 Orthogroups_2024-Update
PSME_00023360-RA No alias (p35694|bru1_soybn : 312.0) Brassinosteroid-regulated... 0.04 Orthogroups_2024-Update
PSME_00031691-RA No alias (p35694|bru1_soybn : 332.0) Brassinosteroid-regulated... 0.04 Orthogroups_2024-Update
PSME_00033177-RA No alias (at4g25810 : 347.0) xyloglucan... 0.03 Orthogroups_2024-Update
PSME_00047371-RA No alias (p35694|bru1_soybn : 289.0) Brassinosteroid-regulated... 0.03 Orthogroups_2024-Update
PSME_00050083-RA No alias (at4g03210 : 328.0) encodes a member of xyloglucan... 0.03 Orthogroups_2024-Update
PSME_00055766-RA No alias (q8lnz5|xthb_phaan : 137.0) Probable xyloglucan... 0.03 Orthogroups_2024-Update
Potri.011G077300 No alias xyloglucan endotransglucosylase/hydrolase 16 0.03 Orthogroups_2024-Update
Potri.014G146100 No alias xyloglucan endotransglucosylase/hydrolase 16 0.03 Orthogroups_2024-Update
Pp1s309_36V6 No alias Probable xyloglucan endotransglucosylase/hydrolase... 0.03 Orthogroups_2024-Update
Seita.4G246400.1 No alias EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update
Seita.9G573900.1 No alias xyloglucan endotransglucosylase/hydrolase *(XTH) &... 0.02 Orthogroups_2024-Update
Solyc03g093110 No alias xyloglucan endotransglucosylase-hydrolase 0.03 Orthogroups_2024-Update
Solyc07g006860 No alias Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc11g065600 No alias xyloglucan endotransglucosylase-hydrolase 4 0.04 Orthogroups_2024-Update
Solyc12g007250 No alias Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen03g023900 No alias Glycosyl hydrolases family 16 0.04 Orthogroups_2024-Update
Sopen07g029340 No alias Glycosyl hydrolases family 16 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA 16Dec
CC GO:0005618 cell wall IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
BP GO:0006073 cellular glucan metabolic process IEA 16Dec
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEA 16Dec
CC GO:0048046 apoplast IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR010713 XET_C 273 309
IPR000757 GH16 55 239
No external refs found!