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  5. Sobic.001G320300.1

Sobic.001G320300.1


Description : Unknown function


Gene families : OG_42_0000273 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000273_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G320300.1
Cluster HCAA Clusters: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
429523 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.02 Orthogroups_2024-Update
A4A49_15585 No alias protein hothead 0.03 Orthogroups_2024-Update
At1g73050 No alias (R)-mandelonitrile lyase-like... 0.03 Orthogroups_2024-Update
Brara.B01521.1 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_10433135g0010 No alias (at1g12570 : 252.0) Glucose-methanol-choline (GMC)... 0.02 Orthogroups_2024-Update
MA_41268g0010 No alias (at1g12570 : 455.0) Glucose-methanol-choline (GMC)... 0.03 Orthogroups_2024-Update
PSME_00039380-RA No alias (at1g12570 : 462.0) Glucose-methanol-choline (GMC)... 0.02 Orthogroups_2024-Update
PSME_00041186-RA No alias (at1g12570 : 451.0) Glucose-methanol-choline (GMC)... 0.02 Orthogroups_2024-Update
Seita.9G347800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc03g121600 No alias Glucose-methanol-choline (GMC) oxidoreductase family... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEA 16Dec
MF GO:0050660 flavin adenine dinucleotide binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0005875 microtubule associated complex IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predicted GO
MF GO:0042887 amide transmembrane transporter activity IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
MF GO:1904680 peptide transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000172 GMC_OxRdtase_N 50 322
IPR007867 GMC_OxRtase_C 424 569
No external refs found!