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  5. Sobic.001G320900.1

Sobic.001G320900.1


Description : metabolite transporter *(DTX)


Gene families : OG_42_0000378 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000378_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G320900.1
Cluster HCAA Clusters: Cluster_217

Target Alias Description ECC score Gene Family Method Actions
111626 No alias MATE efflux family protein 0.02 Orthogroups_2024-Update
A4A49_37574 No alias protein detoxification 49 0.05 Orthogroups_2024-Update
Brara.A00811.1 No alias metabolite transporter *(DTX) 0.05 Orthogroups_2024-Update
Brara.C01451.1 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update
Glyma.07G124600 No alias MATE efflux family protein 0.04 Orthogroups_2024-Update
Glyma.09G276100 No alias MATE efflux family protein 0.02 Orthogroups_2024-Update
MA_2674g0010 No alias (at1g58340 : 654.0) ZF14; FUNCTIONS IN: antiporter... 0.04 Orthogroups_2024-Update
PSME_00022530-RA No alias (at1g71870 : 285.0) MATE efflux family protein;... 0.03 Orthogroups_2024-Update
PSME_00039669-RA No alias (at1g71870 : 421.0) MATE efflux family protein;... 0.03 Orthogroups_2024-Update
Potri.019G086100 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
Seita.6G235400.1 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update
Seita.9G481000.1 No alias metabolite transporter *(DTX) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0015297 antiporter activity IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
MF GO:0042910 xenobiotic transmembrane transporter activity IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002528 MATE_fam 87 247
IPR002528 MATE_fam 313 473
No external refs found!