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  5. Sobic.001G321500.1

Sobic.001G321500.1


Description : substrate adaptor of SCF E3 ubiquitin ligase complex


Gene families : OG_42_0000800 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000800_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G321500.1
Cluster HCAA Clusters: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
A4A49_02861 No alias f-box protein pp2-a15 0.04 Orthogroups_2024-Update
A4A49_35789 No alias f-box protein pp2-a13 0.02 Orthogroups_2024-Update
At1g12710 No alias phloem protein 2-A12 [Source:TAIR;Acc:AT1G12710] 0.04 Orthogroups_2024-Update
Brara.F00840.1 No alias substrate adaptor of SCF E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
GRMZM2G088482 No alias phloem protein 2-A13 0.03 Orthogroups_2024-Update
HORVU2Hr1G005080.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G532000.1 No alias substrate adaptor of SCF E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
Solyc09g008820 No alias F-box protein PP2-A13 (AHRD V3.3 *** A0A072U2Z8_MEDTR) 0.04 Orthogroups_2024-Update
Solyc10g083730 No alias F-box protein PP2-A13 (AHRD V3.3 *** A0A072U2Z8_MEDTR) 0.04 Orthogroups_2024-Update
Solyc12g056410 No alias F-box protein PP2-A13 (AHRD V3.3 *** P2A13_ARATH) 0.04 Orthogroups_2024-Update
Sopen12g029000 No alias Phloem protein 2 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051499 D-aminoacyl-tRNA deacylase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR025886 PP2-like 128 286
No external refs found!