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  5. Sobic.001G321800.1

Sobic.001G321800.1


Description : protease *(RBL)


Gene families : OG_42_0000533 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000533_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G321800.1
Cluster HCAA Clusters: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
At3g53780 No alias RHOMBOID-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:F4JBM4] 0.03 Orthogroups_2024-Update
Bradi3g42100 No alias RHOMBOID-like 2 0.03 Orthogroups_2024-Update
Bradi3g42110 No alias RHOMBOID-like 2 0.02 Orthogroups_2024-Update
Brara.J02499.1 No alias protease *(RBL) 0.03 Orthogroups_2024-Update
Glyma.04G254500 No alias Rhomboid-related intramembrane serine protease family protein 0.04 Orthogroups_2024-Update
Glyma.07G132800 No alias RHOMBOID-like 1 0.05 Orthogroups_2024-Update
Glyma.15G009000 No alias RHOMBOID-like protein 5 0.02 Orthogroups_2024-Update
Glyma.18G181800 No alias RHOMBOID-like 1 0.09 Orthogroups_2024-Update
LOC_Os08g43320 No alias OsRhmbd14 - Putative Rhomboid homologue, expressed 0.02 Orthogroups_2024-Update
PSME_00032438-RA No alias (at2g29050 : 202.0) RHOMBOID-like 1 (RBL1); FUNCTIONS... 0.03 Orthogroups_2024-Update
Potri.002G090400 No alias Rhomboid-related intramembrane serine protease family protein 0.03 Orthogroups_2024-Update
Pp1s84_202V6 No alias membrane protein 0.02 Orthogroups_2024-Update
Seita.6G235900.1 No alias protease *(RBL) 0.03 Orthogroups_2024-Update
Seita.9G349500.1 No alias protease *(RBL) 0.11 Orthogroups_2024-Update
Seita.9G567800.1 No alias protease *(RBL) 0.03 Orthogroups_2024-Update
Sobic.005G229166.1 No alias protease *(RBL) 0.02 Orthogroups_2024-Update
Solyc03g026080 No alias Rhomboid-like protein (AHRD V3.3 *** K4BF81_SOLLC) 0.03 Orthogroups_2024-Update
Sopen03g004920 No alias Rhomboid family 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR022764 Peptidase_S54_rhomboid_dom 118 260
No external refs found!