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  5. Sobic.001G325500.1

Sobic.001G325500.1


Description : Unknown function


Gene families : OG_42_0000341 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000341_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G325500.1
Cluster HCAA Clusters: Cluster_373

Target Alias Description ECC score Gene Family Method Actions
Bradi2g19470 No alias Protein of unknown function (DUF1677) 0.03 Orthogroups_2024-Update
Bradi2g20325 No alias Protein of unknown function (DUF1677) 0.03 Orthogroups_2024-Update
GRMZM2G080567 No alias Protein of unknown function (DUF1677) 0.02 Orthogroups_2024-Update
GRMZM2G453139 No alias Protein of unknown function (DUF1677) 0.02 Orthogroups_2024-Update
LOC_Os01g54140 No alias expressed protein 0.04 Orthogroups_2024-Update
Pp1s2_210V6 No alias F19K16.25; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.1G027600.1 No alias Unknown function 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
MF GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006405 RNA export from nucleus IEP Predicted GO
BP GO:0006406 mRNA export from nucleus IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
BP GO:0015939 pantothenate metabolic process IEP Predicted GO
BP GO:0015940 pantothenate biosynthetic process IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:0050657 nucleic acid transport IEP Predicted GO
BP GO:0050658 RNA transport IEP Predicted GO
BP GO:0051028 mRNA transport IEP Predicted GO
BP GO:0051168 nuclear export IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051236 establishment of RNA localization IEP Predicted GO
InterPro domains Description Start Stop
IPR012876 DUF1677_pln 3 89
No external refs found!