Sobic.001G330200.1


Description : C2H2-type subclass ZAT transcription factor


Gene families : OG_42_0000046 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G330200.1
Cluster HCAA Clusters: Cluster_249

Target Alias Description ECC score Gene Family Method Actions
A4A49_01661 No alias zinc finger protein zat10 0.05 Orthogroups_2024-Update
At2g28200 No alias Zinc finger protein ZAT5 [Source:UniProtKB/Swiss-Prot;Acc:Q681X4] 0.02 Orthogroups_2024-Update
At3g46070 No alias C2H2-type zinc finger family protein... 0.03 Orthogroups_2024-Update
Bradi4g09410 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
Brara.A02157.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Brara.B03976.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Brara.C04299.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Brara.J01055.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Brara.J01350.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Brara.J02815.1 No alias C2H2-type subclass ZAT transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G035103 No alias salt tolerance zinc finger 0.04 Orthogroups_2024-Update
GRMZM2G113860 No alias zinc-finger protein 2 0.03 Orthogroups_2024-Update
Glyma.03G186000 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.04G044900 No alias salt tolerance zinc finger 0.03 Orthogroups_2024-Update
Glyma.19G186200 No alias C2H2-type zinc finger family protein 0.02 Orthogroups_2024-Update
HORVU5Hr1G045780.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
HORVU5Hr1G113130.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
LOC_Os03g60570 No alias ZOS3-22 - C2H2 zinc finger protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g46670 No alias ZOS4-09 - C2H2 zinc finger protein, expressed 0.03 Orthogroups_2024-Update
MA_19127g0010 No alias (at1g02040 : 100.0) C2H2-type zinc finger family... 0.03 Orthogroups_2024-Update
PSME_00015139-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00056793-RA No alias (at1g02040 : 87.8) C2H2-type zinc finger family protein;... 0.03 Orthogroups_2024-Update
Potri.002G119300 No alias salt tolerance zinc finger 0.03 Orthogroups_2024-Update
Potri.010G209400 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
Potri.014G017300 No alias salt tolerance zinc finger 0.03 Orthogroups_2024-Update
Pp1s286_28V6 No alias cys2 his2 zinc-finger transcription factor 0.02 Orthogroups_2024-Update
Seita.8G248000.1 No alias C2H2-type subclass ZAT transcription factor 0.06 Orthogroups_2024-Update
Seita.9G034400.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Seita.9G357400.1 No alias C2H2-type subclass ZAT transcription factor 0.05 Orthogroups_2024-Update
Seita.9G361000.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G035000.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G079500.1 No alias C2H2-type subclass ZAT transcription factor 0.04 Orthogroups_2024-Update
Sobic.005G025100.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Sobic.009G164600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc05g054650 No alias Zinc finger family protein (AHRD V3.3 *** B9HM54_POPTR) 0.03 Orthogroups_2024-Update
Solyc05g054660 No alias Zinc finger family protein (AHRD V3.3 *** B9HM54_POPTR) 0.02 Orthogroups_2024-Update
Solyc11g073060 No alias Zinc finger family protein (AHRD V3.3 *** B9HM54_POPTR) 0.03 Orthogroups_2024-Update
Sopen05g033130 No alias C2H2-type zinc finger 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0002682 regulation of immune system process IEP Predicted GO
BP GO:0002831 regulation of response to biotic stimulus IEP Predicted GO
BP GO:0010112 regulation of systemic acquired resistance IEP Predicted GO
BP GO:0031347 regulation of defense response IEP Predicted GO
BP GO:0032101 regulation of response to external stimulus IEP Predicted GO
BP GO:0043900 regulation of multi-organism process IEP Predicted GO
BP GO:0045088 regulation of innate immune response IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0050776 regulation of immune response IEP Predicted GO
BP GO:0080134 regulation of response to stress IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!