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  5. Sobic.001G330500.1

Sobic.001G330500.1


Description : Unknown function


Gene families : OG_42_0000642 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000642_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G330500.1
Cluster HCAA Clusters: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
At1g33670 No alias Leucine-rich repeat (LRR) family protein... 0.04 Orthogroups_2024-Update
Brara.C00272.1 No alias pathogen polygalacturonase inhibitor *(PGIP) 0.01 Orthogroups_2024-Update
Glyma.15G209200 No alias polygalacturonase inhibiting protein 1 0.02 Orthogroups_2024-Update
Potri.006G058600 No alias polygalacturonase inhibiting protein 1 0.02 Orthogroups_2024-Update
Seita.3G071400.1 No alias pathogen polygalacturonase inhibitor *(PGIP) 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 33 70
No external refs found!