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  5. Sobic.001G331600.1

Sobic.001G331600.1


Description : LON-type protease


Gene families : OG_42_0006524 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006524_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G331600.1
Cluster HCAA Clusters: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
A4A49_23521 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Bradi1g16075 No alias zinc finger (C3HC4-type RING finger) family protein 0.04 Orthogroups_2024-Update
Brara.F01326.1 No alias LON-type protease 0.04 Orthogroups_2024-Update
Brara.I04778.1 No alias LON-type protease 0.03 Orthogroups_2024-Update
GRMZM2G032821 No alias zinc finger (C3HC4-type RING finger) family protein 0.05 Orthogroups_2024-Update
Glyma.04G165900 No alias zinc finger (C3HC4-type RING finger) family protein 0.04 Orthogroups_2024-Update
Mp3g02630.1 No alias protease (LON) 0.03 Orthogroups_2024-Update
Pp1s104_101V6 No alias lon peptidase n-terminal domain and ring finger 1 0.05 Orthogroups_2024-Update
Seita.9G359100.1 No alias LON-type protease 0.07 Orthogroups_2024-Update
Solyc03g115720 No alias zinc finger (C3HC4-type RING finger) family protein... 0.02 Orthogroups_2024-Update
evm.model.contig_2112.10 No alias (at1g18660 : 103.0) zinc finger (C3HC4-type RING finger)... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
MF GO:0005548 phospholipid transporter activity IEP Predicted GO
BP GO:0006536 glutamate metabolic process IEP Predicted GO
BP GO:0006537 glutamate biosynthetic process IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
BP GO:0015748 organophosphate ester transport IEP Predicted GO
BP GO:0015914 phospholipid transport IEP Predicted GO
MF GO:0015930 glutamate synthase activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
BP GO:0017006 protein-tetrapyrrole linkage IEP Predicted GO
BP GO:0017007 protein-bilin linkage IEP Predicted GO
BP GO:0017009 protein-phycocyanobilin linkage IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR019734 TPR_repeat 40 68
IPR003111 Lon_substr-bd 276 470
No external refs found!