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  5. Sobic.001G331800.1

Sobic.001G331800.1


Description : regulatory protein *(AGO7) of transacting siRNA pathway


Gene families : OG_42_0000134 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000134_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G331800.1
Cluster HCAA Clusters: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
AC217043.3_FG007 No alias Argonaute family protein 0.03 Orthogroups_2024-Update
Brara.G01334.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.I02739.1 No alias siRNA-binding factor *(AGO2) of non-canonical RdDM pathway 0.03 Orthogroups_2024-Update
GRMZM2G450474 No alias Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.04 Orthogroups_2024-Update
Seita.9G045600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G136150.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEP Predicted GO
InterPro domains Description Start Stop
IPR003165 Piwi 689 993
IPR014811 ArgoL1 342 390
IPR003100 PAZ_dom 404 526
IPR032474 Argonaute_N 186 331
No external refs found!