Sobic.001G333700.1


Description : C2H2-type subclass ZAT transcription factor


Gene families : OG_42_0000046 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G333700.1
Cluster HCAA Clusters: Cluster_267

Target Alias Description ECC score Gene Family Method Actions
A4A49_12201 No alias zinc finger protein zat5 0.03 Orthogroups_2024-Update
A4A49_29565 No alias zinc finger protein zat5 0.02 Orthogroups_2024-Update
A4A49_32244 No alias zinc finger protein zat11 0.03 Orthogroups_2024-Update
A4A49_40512 No alias zinc finger protein zat10 0.03 Orthogroups_2024-Update
A4A49_41461 No alias zinc finger protein zat10 0.03 Orthogroups_2024-Update
At1g27730 No alias Zinc finger protein ZAT10... 0.02 Orthogroups_2024-Update
At1g49900 No alias C2H2 type zinc finger transcription factor family... 0.03 Orthogroups_2024-Update
At2g26940 No alias C2H2-type zinc finger family protein... 0.03 Orthogroups_2024-Update
At3g46070 No alias C2H2-type zinc finger family protein... 0.02 Orthogroups_2024-Update
Bradi4g09410 No alias C2H2-type zinc finger family protein 0.02 Orthogroups_2024-Update
Brara.B01283.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.C04299.1 No alias C2H2-type subclass ZAT transcription factor 0.02 Orthogroups_2024-Update
Brara.F01949.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Brara.F02478.1 No alias C2H2-type subclass ZAT transcription factor 0.02 Orthogroups_2024-Update
Brara.G01602.1 No alias C2H2-type subclass ZAT transcription factor 0.04 Orthogroups_2024-Update
Brara.I03003.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G140033 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
GRMZM2G361210 No alias C2H2-type zinc finger family protein 0.05 Orthogroups_2024-Update
Glyma.04G044900 No alias salt tolerance zinc finger 0.03 Orthogroups_2024-Update
Glyma.10G059700 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
Glyma.11G142500 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
Glyma.12G081400 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
Glyma.12G178900 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
Glyma.14G088300 No alias salt tolerance zinc finger 0.02 Orthogroups_2024-Update
Glyma.18G287200 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Glyma.20G133200 No alias salt tolerance zinc finger 0.01 Orthogroups_2024-Update
LOC_Os03g60570 No alias ZOS3-22 - C2H2 zinc finger protein, expressed 0.03 Orthogroups_2024-Update
MA_101494g0010 No alias (at1g02040 : 99.8) C2H2-type zinc finger family protein;... 0.02 Orthogroups_2024-Update
MA_109421g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_602g0010 No alias (at5g56200 : 91.3) C2H2 type zinc finger transcription... 0.02 Orthogroups_2024-Update
MA_9316262g0010 No alias (at2g45120 : 86.3) C2H2-like zinc finger protein;... 0.06 Orthogroups_2024-Update
PSME_00015139-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00056793-RA No alias (at1g02040 : 87.8) C2H2-type zinc finger family protein;... 0.05 Orthogroups_2024-Update
PSME_00056858-RA No alias (at5g56200 : 86.7) C2H2 type zinc finger transcription... 0.03 Orthogroups_2024-Update
Potri.010G229400 No alias C2H2-type zinc finger family protein 0.02 Orthogroups_2024-Update
Potri.014G017300 No alias salt tolerance zinc finger 0.03 Orthogroups_2024-Update
Seita.1G261200.1 No alias C2H2-type subclass ZAT transcription factor & C2H2-type... 0.03 Orthogroups_2024-Update
Seita.5G374800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.8G248000.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Seita.9G357400.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Seita.9G357600.1 No alias C2H2-type subclass ZAT transcription factor 0.04 Orthogroups_2024-Update
Seita.9G361000.1 No alias C2H2-type subclass ZAT transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G035000.1 No alias C2H2-type subclass ZAT transcription factor 0.04 Orthogroups_2024-Update
Sobic.001G079500.1 No alias C2H2-type subclass ZAT transcription factor 0.05 Orthogroups_2024-Update
Sobic.001G330100.1 No alias C2H2-type subclass ZAT transcription factor 0.04 Orthogroups_2024-Update
Solyc06g060480 No alias Zinc finger family protein (AHRD V3.3 *** B9HPY6_POPTR) 0.03 Orthogroups_2024-Update
Solyc09g008440 No alias Zinc finger family protein (AHRD V3.3 *** B9N876_POPTR) 0.02 Orthogroups_2024-Update
Solyc11g073060 No alias Zinc finger family protein (AHRD V3.3 *** B9HM54_POPTR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004834 tryptophan synthase activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
CC GO:0005811 lipid droplet IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006568 tryptophan metabolic process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006586 indolalkylamine metabolic process IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0042430 indole-containing compound metabolic process IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!