1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.001G336700.1

Sobic.001G336700.1


Description : regulatory protein *(COB) of cellulose-hemicellulose network assembly


Gene families : OG_42_0000486 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000486_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G336700.1
Cluster HCAA Clusters: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
A4A49_19524 No alias protein cobra 0.02 Orthogroups_2024-Update
Bradi1g22030 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.03 Orthogroups_2024-Update
Bradi5g17087 No alias COBRA-like protein 1 precursor 0.05 Orthogroups_2024-Update
Glyma.02G196100 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.04 Orthogroups_2024-Update
Glyma.06G005800 No alias COBRA-like protein 1 precursor 0.04 Orthogroups_2024-Update
Glyma.13G053200 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.09 Orthogroups_2024-Update
HORVU0Hr1G004650.4 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.07 Orthogroups_2024-Update
MA_637485g0010 No alias (at3g02210 : 634.0) COBRA-like protein 1 precursor... 0.03 Orthogroups_2024-Update
PSME_00031309-RA No alias (q6z4g8|cobl1_orysa : 643.0) COBRA-like 1 protein... 0.02 Orthogroups_2024-Update
Potri.004G167100 No alias COBRA-like protein 1 precursor 0.02 Orthogroups_2024-Update
Potri.015G060200 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.02 Orthogroups_2024-Update
Sobic.002G368300.1 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0010215 cellulose microfibril organization IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
InterPro domains Description Start Stop
IPR006918 COBRA_pln 50 213
No external refs found!