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  5. Sobic.001G339000.1

Sobic.001G339000.1


Description : EC_4.2 carbon-oxygen lyase & mono-/sesquiterpene-/diterpene synthase


Gene families : OG_42_0000137 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000137_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G339000.1
Cluster HCAA Clusters: Cluster_288

Target Alias Description ECC score Gene Family Method Actions
Bradi1g62538 No alias terpene synthase 21 0.01 Orthogroups_2024-Update
Brara.K01797.1 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
HORVU2Hr1G023900.1 No alias EC_4.2 carbon-oxygen lyase 0.04 Orthogroups_2024-Update
LOC_Os04g27720 No alias terpene synthase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g07080 No alias terpene synthase, putative, expressed 0.03 Orthogroups_2024-Update
Seita.7G013300.1 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
Seita.7G145900.1 No alias EC_4.2 carbon-oxygen lyase &... 0.02 Orthogroups_2024-Update
Seita.7G146000.1 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
Sobic.002G065600.2 No alias EC_4.2 carbon-oxygen lyase &... 0.02 Orthogroups_2024-Update
Solyc06g059910 No alias No description available 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA 16Dec
MF GO:0010333 terpene synthase activity IEA 16Dec
MF GO:0016829 lyase activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
InterPro domains Description Start Stop
IPR005630 Terpene_synthase_metal-bd 244 508
IPR001906 Terpene_synth_N 37 212
No external refs found!