1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.001G341800.1

Sobic.001G341800.1


Description : Unknown function


Gene families : OG_42_0002958 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002958_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G341800.1
Cluster HCAA Clusters: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
Brara.H02387.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Glyma.13G111500 No alias inter-alpha-trypsin inhibitor heavy chain-related 0.03 Orthogroups_2024-Update
Potri.018G062500 No alias inter-alpha-trypsin inhibitor heavy chain-related 0.05 Orthogroups_2024-Update
Pp1s127_36V6 No alias F14D16.26; inter-alpha-trypsin inhibitor heavy... 0.04 Orthogroups_2024-Update
Seita.2G386800.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Seita.9G369400.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sopen12g004110 No alias von Willebrand factor type A domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004096 catalase activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
CC GO:0005956 protein kinase CK2 complex IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0019207 kinase regulator activity IEP Predicted GO
MF GO:0019887 protein kinase regulator activity IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002035 VWF_A 334 491
No external refs found!