Solyc03g093650

Description : ABC transporter B family protein (AHRD V3.3 *** A0A072UBK0_MEDTR)

Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc03g093650
Cluster	HCCA clusters: Cluster_112

Target	Alias	Description	ECC score	Gene Family Method
169182	No alias	ATP binding cassette subfamily B4	0.02	Orthogroups_2024-Update
A4A49_02254	No alias	abc transporter b family member 11	0.03	Orthogroups_2024-Update
Bradi2g47330	No alias	P-glycoprotein 11	0.03	Orthogroups_2024-Update
Bradi2g47400	No alias	ATP binding cassette subfamily B4	0.02	Orthogroups_2024-Update
GRMZM2G085236	No alias	ATP binding cassette subfamily B19	0.03	Orthogroups_2024-Update
Glyma.10G055000	No alias	ATP binding cassette subfamily B1	0.03	Orthogroups_2024-Update
Glyma.17G041200	No alias	P-glycoprotein 11	0.02	Orthogroups_2024-Update
HORVU3Hr1G065320.10	No alias	Unknown function	0.03	Orthogroups_2024-Update
HORVU7Hr1G071870.23	No alias	Unknown function	0.03	Orthogroups_2024-Update
LOC_Os01g29870	No alias	multidrug resistance protein 9, putative, expressed	0.04	Orthogroups_2024-Update
Mp1g26440.1	No alias	subfamily ABCB transporter	0.02	Orthogroups_2024-Update
Mp2g11920.1	No alias	subfamily ABCB transporter	0.02	Orthogroups_2024-Update
PSME_00016714-RA	No alias	(q6yuu5\|mdr_orysa : 1107.0) Putative multidrug...	0.02	Orthogroups_2024-Update
PSME_00023263-RA	No alias	(q6yuu5\|mdr_orysa : 1044.0) Putative multidrug...	0.02	Orthogroups_2024-Update
PSME_00023264-RA	No alias	(q6yuu5\|mdr_orysa : 1318.0) Putative multidrug...	0.02	Orthogroups_2024-Update
PSME_00030174-RA	No alias	(at2g47000 : 1538.0) Multidrug resistance ...	0.03	Orthogroups_2024-Update
Potri.001G165000	No alias	ATP binding cassette subfamily B19	0.03	Orthogroups_2024-Update
Potri.001G417600	No alias	ABC transporter family protein	0.02	Orthogroups_2024-Update
Potri.002G019600	No alias	P-glycoprotein 13	0.02	Orthogroups_2024-Update
Potri.003G094400	No alias	P-glycoprotein 2	0.03	Orthogroups_2024-Update
Potri.010G003000	No alias	ATP binding cassette subfamily B4	0.02	Orthogroups_2024-Update
Potri.014G113000	No alias	ATP binding cassette subfamily B4	0.03	Orthogroups_2024-Update
Potri.017G074000	No alias	ABC transporter family protein	0.04	Orthogroups_2024-Update
Potri.017G085000	No alias	ABC transporter family protein	0.03	Orthogroups_2024-Update
Seita.6G060300.1	No alias	subfamily ABCB transporter	0.04	Orthogroups_2024-Update
Solyc06g009290	No alias	ABC transporter B family protein (AHRD V3.3 *** G7IBR0_MEDTR)	0.03	Orthogroups_2024-Update
Solyc07g064120	No alias	ABC transporter B family protein (AHRD V3.3 *** G7JF16_MEDTR)	0.03	Orthogroups_2024-Update
Solyc12g098840	No alias	ABC transporter B family protein (AHRD V3.3 *** G7IBR0_MEDTR)	0.03	Orthogroups_2024-Update
Solyc12g098870	No alias	ABC transporter B family protein (AHRD V3.3 *** G7IBR0_MEDTR)	0.03	Orthogroups_2024-Update
Sopen02g032160	No alias	ABC transporter transmembrane region	0.03	Orthogroups_2024-Update
Sopen09g003060	No alias	ABC transporter transmembrane region	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	IEA	InterProScan predictions
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042623	ATPase activity, coupled	None	Extended
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043492	ATPase activity, coupled to movement of substances	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000228	nuclear chromosome	IEP	Predicted GO
CC	GO:0005694	chromosome	IEP	Predicted GO
BP	GO:0006835	dicarboxylic acid transport	IEP	Predicted GO
BP	GO:0015740	C4-dicarboxylate transport	IEP	Predicted GO
BP	GO:0015743	malate transport	IEP	Predicted GO
BP	GO:0071702	organic substance transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	376	525
IPR003439	ABC_transporter-like	1006	1155
IPR011527	ABC1_TM_dom	48	296
IPR011527	ABC1_TM_dom	664	934

External Links

No external refs found!

Solyc03g093650

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation