1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.001G344400.1

Sobic.001G344400.1


Description : ketoacyl-ACP synthase II


Gene families : OG_42_0000557 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000557_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G344400.1
Cluster HCAA Clusters: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
Bradi1g20860 No alias fatty acid biosynthesis 1 0.03 Orthogroups_2024-Update
Bradi1g60300 No alias fatty acid biosynthesis 1 0.06 Orthogroups_2024-Update
Cre07.g335300 No alias fatty acid biosynthesis 1 0.02 Orthogroups_2024-Update
Glyma.13G112700 No alias fatty acid biosynthesis 1 0.04 Orthogroups_2024-Update
Glyma.17G047000 No alias fatty acid biosynthesis 1 0.02 Orthogroups_2024-Update
HORVU2Hr1G077970.1 No alias ketoacyl-ACP synthase I 0.05 Orthogroups_2024-Update
HORVU4Hr1G041610.1 No alias ketoacyl-ACP synthase II 0.03 Orthogroups_2024-Update
LOC_Os04g36800 No alias 3-oxoacyl-synthase, putative, expressed 0.02 Orthogroups_2024-Update
Potri.004G131500 No alias 3-ketoacyl-acyl carrier protein synthase I 0.03 Orthogroups_2024-Update
Seita.9G371500.1 No alias ketoacyl-ACP synthase II 0.03 Orthogroups_2024-Update
Solyc08g016170 No alias 3-oxoacyl-[acyl-carrier-protein] synthase (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
evm.model.contig_4451.6 No alias (p23902|kasc1_horvu : 473.0)... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008883 glutamyl-tRNA reductase activity IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0010206 photosystem II repair IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Predicted GO
BP GO:0015986 ATP synthesis coupled proton transport IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
MF GO:0019829 cation-transporting ATPase activity IEP Predicted GO
MF GO:0022853 active ion transmembrane transporter activity IEP Predicted GO
BP GO:0030091 protein repair IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Predicted GO
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predicted GO
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR014031 Ketoacyl_synth_C 334 447
IPR014030 Ketoacyl_synth_N 81 326
No external refs found!