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  5. At3g42960

At3g42960


Description : Short-chain dehydrogenase reductase ATA1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1K9]


Gene families : OG_42_0000111 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000111_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g42960
Cluster HCCA clusters: Cluster_207

Target Alias Description ECC score Gene Family Method Actions
A4A49_61240 No alias momilactone a synthase 0.03 Orthogroups_2024-Update
At2g47150 No alias NAD(P)-binding Rossmann-fold superfamily protein... 0.03 Orthogroups_2024-Update
Bradi5g13830 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
Brara.C02351.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Glyma.11G180800 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.06 Orthogroups_2024-Update
LOC_Os12g16010 No alias sex determination protein tasselseed-2, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00002674-RA No alias (at3g51680 : 247.0) NAD(P)-binding Rossmann-fold... 0.02 Orthogroups_2024-Update
PSME_00006758-RA No alias (at3g51680 : 301.0) NAD(P)-binding Rossmann-fold... 0.02 Orthogroups_2024-Update
PSME_00035258-RA No alias (at3g51680 : 253.0) NAD(P)-binding Rossmann-fold... 0.04 Orthogroups_2024-Update
PSME_00047761-RA No alias (at3g51680 : 270.0) NAD(P)-binding Rossmann-fold... 0.03 Orthogroups_2024-Update
Seita.2G422400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc10g085380 No alias Short-chain dehydrogenase/reductase family protein (AHRD... 0.04 Orthogroups_2024-Update
Sopen10g034840 No alias short chain dehydrogenase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
BP GO:0015858 nucleoside transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
BP GO:1901642 nucleoside transmembrane transport IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!