Sobic.001G356500.1

Description : RNA splicing factor *(PTB)

Gene families : OG_42_0002256 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002256_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.001G356500.1
Cluster	HCAA Clusters: Cluster_12

Target	Alias	Description	ECC score	Gene Family Method	Actions
Potri.012G029300	No alias	polypyrimidine tract-binding protein 2	0.02	Orthogroups_2024-Update
Potri.015G020800	No alias	polypyrimidine tract-binding protein 2	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004386	helicase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	23	73
IPR021790	DUF3355	243	322

External Links

No external refs found!