Description : pre-40S ribosomal-subunit proteome nuclear export factor *(Ltv1)
Gene families : OG_42_0004945 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004945_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Sorghum bicolor: Sobic.001G358600.3 | |
Cluster | HCAA Clusters: Cluster_164 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi1g61380 | No alias | Function unknown | 0.06 | Orthogroups_2024-Update | |
Brara.C04302.1 | No alias | pre-40S ribosomal-subunit proteome nuclear export factor *(Ltv1) | 0.05 | Orthogroups_2024-Update | |
Cre02.g146000 | No alias | Function unknown | 0.05 | Orthogroups_2024-Update | |
Kfl00006_0390 | kfl00006_0390_v1.1 | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update | |
LOC_Os03g25620 | No alias | LTV1, putative, expressed | 0.03 | Orthogroups_2024-Update | |
Pp1s306_41V6 | No alias | F3A4.70; expressed protein [Arabidopsis thaliana] | 0.04 | Orthogroups_2024-Update | |
Seita.9G390500.1 | No alias | pre-40S ribosomal-subunit proteome nuclear export factor *(Ltv1) | 0.18 | Orthogroups_2024-Update | |
Solyc04g081030 | No alias | LTV1, putative (AHRD V3.3 *** A0A061ENH3_THECC) | 0.12 | Orthogroups_2024-Update | |
Sopen04g034650 | No alias | hypothetical protein | 0.08 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Predicted GO |
MF | GO:0001882 | nucleoside binding | IEP | Predicted GO |
MF | GO:0001883 | purine nucleoside binding | IEP | Predicted GO |
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0004559 | alpha-mannosidase activity | IEP | Predicted GO |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Predicted GO |
MF | GO:0005488 | binding | IEP | Predicted GO |
MF | GO:0005524 | ATP binding | IEP | Predicted GO |
MF | GO:0005525 | GTP binding | IEP | Predicted GO |
CC | GO:0005730 | nucleolus | IEP | Predicted GO |
CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Predicted GO |
BP | GO:0006013 | mannose metabolic process | IEP | Predicted GO |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006364 | rRNA processing | IEP | Predicted GO |
BP | GO:0006396 | RNA processing | IEP | Predicted GO |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
MF | GO:0008134 | transcription factor binding | IEP | Predicted GO |
MF | GO:0008144 | drug binding | IEP | Predicted GO |
MF | GO:0015923 | mannosidase activity | IEP | Predicted GO |
BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
BP | GO:0016072 | rRNA metabolic process | IEP | Predicted GO |
MF | GO:0016462 | pyrophosphatase activity | IEP | Predicted GO |
BP | GO:0016567 | protein ubiquitination | IEP | Predicted GO |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | Predicted GO |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Predicted GO |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Predicted GO |
MF | GO:0017076 | purine nucleotide binding | IEP | Predicted GO |
MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Predicted GO |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Predicted GO |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Predicted GO |
MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Predicted GO |
BP | GO:0032446 | protein modification by small protein conjugation | IEP | Predicted GO |
MF | GO:0032549 | ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032550 | purine ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032553 | ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Predicted GO |
BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
MF | GO:0036094 | small molecule binding | IEP | Predicted GO |
MF | GO:0043168 | anion binding | IEP | Predicted GO |
CC | GO:0044428 | nuclear part | IEP | Predicted GO |
CC | GO:0044445 | cytosolic part | IEP | Predicted GO |
BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Predicted GO |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
CC | GO:0090730 | Las1 complex | IEP | Predicted GO |
MF | GO:0097159 | organic cyclic compound binding | IEP | Predicted GO |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Predicted GO |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Predicted GO |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
MF | GO:1901363 | heterocyclic compound binding | IEP | Predicted GO |
CC | GO:1902555 | endoribonuclease complex | IEP | Predicted GO |
CC | GO:1902911 | protein kinase complex | IEP | Predicted GO |
CC | GO:1905348 | endonuclease complex | IEP | Predicted GO |
CC | GO:1905354 | exoribonuclease complex | IEP | Predicted GO |
No InterPro domains available for this sequence
No external refs found! |