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  5. Sobic.001G368600.1

Sobic.001G368600.1


Description : regulatory protein *(ROQH1) of non-photochemical quenching


Gene families : OG_42_0005509 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005509_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G368600.1
Cluster HCAA Clusters: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Bradi1g62240 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.08 Orthogroups_2024-Update
Cre03.g181250 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
Glyma.03G092500 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.04 Orthogroups_2024-Update
Kfl00398_0040 kfl00398_0040_v1.1 (at4g31530 : 295.0) NAD(P)-binding Rossmann-fold... 0.02 Orthogroups_2024-Update
Pp1s17_43V6 No alias nad-dependent epimerase dehydratase 0.02 Orthogroups_2024-Update
Seita.9G400700.1 No alias regulatory protein *(ROQH1) of non-photochemical quenching 0.1 Orthogroups_2024-Update
Solyc01g008920 No alias NAD(P)-binding Rossmann-fold superfamily protein isoform... 0.03 Orthogroups_2024-Update
evm.model.tig00000796.24 No alias (at4g31530 : 87.0) NAD(P)-binding Rossmann-fold... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008883 glutamyl-tRNA reductase activity IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0016851 magnesium chelatase activity IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Predicted GO
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 95 303
No external refs found!