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  5. Sobic.001G372000.1

Sobic.001G372000.1


Description : TUB-type transcription factor


Gene families : OG_42_0000271 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000271_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G372000.1
Cluster HCAA Clusters: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
At1g47270 No alias Tubby-like F-box protein 6... 0.03 Orthogroups_2024-Update
Bradi1g62390 No alias tubby like protein 3 0.03 Orthogroups_2024-Update
Bradi5g27110 No alias tubby like protein 1 0.03 Orthogroups_2024-Update
Brara.J00533.1 No alias TUB-type transcription factor 0.02 Orthogroups_2024-Update
Brara.J01702.1 No alias TUB-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.13G269600 No alias tubby like protein 7 0.02 Orthogroups_2024-Update
HORVU6Hr1G068970.3 No alias TUB-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os01g48370 No alias OsFBT1 - F-box and tubby domain containing protein, expressed 0.03 Orthogroups_2024-Update
Potri.002G068200 No alias tubby like protein 5 0.03 Orthogroups_2024-Update
Potri.008G195200 No alias tubby like protein 3 0.03 Orthogroups_2024-Update
Seita.3G148500.1 No alias TUB-type transcription factor 0.03 Orthogroups_2024-Update
Seita.5G393600.1 No alias TUB-type transcription factor 0.03 Orthogroups_2024-Update
Seita.7G062600.1 No alias TUB-type transcription factor 0.02 Orthogroups_2024-Update
Solyc04g071750 No alias Tubby-like F-box protein (AHRD V3.3 *** K4BTG5_SOLLC) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 50 91
IPR000007 Tubby_C 111 394
No external refs found!