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  5. Sobic.001G375100.1

Sobic.001G375100.1


Description : Unknown function


Gene families : OG_42_0000296 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000296_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G375100.1
Cluster HCAA Clusters: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
Bradi1g62731 No alias AAA-type ATPase family protein 0.03 Orthogroups_2024-Update
Bradi2g07520 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Orthogroups_2024-Update
Brara.C02807.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Glyma.10G019300 No alias AAA-type ATPase family protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G075440.6 No alias Unknown function 0.03 Orthogroups_2024-Update
Kfl00055_0110 kfl00055_0110_v1.1 (at4g02480 : 607.0) AAA-type ATPase family protein;... 0.02 Orthogroups_2024-Update
Kfl00238_0170 kfl00238_0170_v1.1 (at1g02890 : 595.0) AAA-type ATPase family protein;... 0.02 Orthogroups_2024-Update
LOC_Os01g43480 No alias AAA-type ATPase family protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g22420 No alias AAA-type ATPase family protein, putative, expressed 0.04 Orthogroups_2024-Update
Mp5g19800.1 No alias Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis... 0.02 Orthogroups_2024-Update
Potri.005G093300 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
Potri.014G131000 No alias AAA-type ATPase family protein 0.02 Orthogroups_2024-Update
Pp1s27_195V6 No alias atp binding 0.03 Orthogroups_2024-Update
Seita.5G011600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.9G407500.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
MF GO:0016887 ATPase activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0002790 peptide secretion IEP Predicted GO
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
CC GO:0005886 plasma membrane IEP Predicted GO
BP GO:0006528 asparagine metabolic process IEP Predicted GO
BP GO:0006529 asparagine biosynthetic process IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009306 protein secretion IEP Predicted GO
BP GO:0016073 snRNA metabolic process IEP Predicted GO
BP GO:0016180 snRNA processing IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
BP GO:0034472 snRNA 3'-end processing IEP Predicted GO
BP GO:0034477 U6 snRNA 3'-end processing IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
BP GO:0043628 ncRNA 3'-end processing IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 846 975
No external refs found!