1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.001G375400.2

Sobic.001G375400.2


Description : Unknown function


Gene families : OG_42_0000141 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000141_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G375400.2
Cluster HCAA Clusters: Cluster_201

Target Alias Description ECC score Gene Family Method Actions
Bradi1g00970 No alias phloem protein 2-B10 0.02 Orthogroups_2024-Update
Bradi3g15160 No alias phloem protein 2-B1 0.02 Orthogroups_2024-Update
Bradi3g54987 No alias phloem protein 2-B12 0.04 Orthogroups_2024-Update
HORVU6Hr1G090000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G012610.1 No alias Unknown function 0.04 Orthogroups_2024-Update
MA_10435077g0020 No alias (at2g02240 : 98.6) maternal effect embryo arrest 66... 0.03 Orthogroups_2024-Update
MA_413510g0010 No alias (at1g09155 : 172.0) phloem protein 2-B15 (PP2-B15);... 0.02 Orthogroups_2024-Update
MA_992082g0010 No alias (at2g02240 : 166.0) maternal effect embryo arrest 66... 0.03 Orthogroups_2024-Update
Seita.8G123700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G341000.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc04g050990 No alias F-box protein PP2 (AHRD V3.3 *** A0A059PC27_CICAR) 0.03 Orthogroups_2024-Update
Sopen11g002670 No alias F-box domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR025886 PP2-like 227 371
No external refs found!